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Microoptics and Microfluidics

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Multiple FOV Imaging Flow Cytometry

Elliptical Nanowire Optics

Microfluidic Tilt Microscopy


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Microfluidic Tilt Microscopy


Focus stacks are useful for a variety of purposes in imaging. Recently, we have demonstrated that fluid flow can transport a sample through focus with nanometer accuracy.  Using fluid flow, focus stacks of individual cells can be produced in a single millisecond at throughputs of 100's of focus stacks per second.

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A linear channel tilted at an angle transports cells through focus


Collected focus stacks of a red blood cell and a Leukemia cell


One application of focus stacks is to produce phase images (using the Transport of Intensity Equation) that quantify optical path differences across the cell.  Phase images can be used to resolve cellular features that are not visible in bright-field images or to quantify cell morphology in depth.

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Phase image of a red blood cell in flow taking a "parachute" shape
Phase image of a Leukemia cell in flow, where the pathlength of sub-cellular features can be resolved


S. S. Gorthi and E. Schonbrun, "Phase imaging flow cytometry using a focus-stack collecting microscope," Opt. Lett, 37, 707-709 (2012).